1. Introduction

 Chikungunya virus (CHIKV)  is mosquito-borne, alpha virus. It causes acute fever and acute and chronic musculoskeletal pain in humans. CHIKV has spread to 22 countries including Pakistan resulting in hundreds of thousands of death across the world. International travel stands out as one of the major risk factors for rapid global spread of the disease. (1, 2) CHIKV can be highly debilitating and large epidemic have severe economic consequences. Re-emergence of Chikungunya virus  is of serious public health concern. (3,4) In the past 10 years, after decades of infrequent, specific outbreaks, the virus has caused major epidemic outbreaks in Africa, Asia, the India Ocean, and more recently the Caribbean and Americas. Chikungunya virus represents a substantial health burden to affected population, with symptoms that include severe joint and muscle pain, rashes, and fever, as well as prolonged periods of disability in some patients. Entry of virus into tissues causes infiltration of innate immune cells, monocytes, macrophages, neutrophils, natural killer cells and adaptive immune cells. Macrophages bearing the replicating virus, in turn, secrete pro-inflammatory cytokines IL-1B, TNF-a, IL-17. (5) Chikungunya virus (CHIKV), an arthropod-borne virus (arbovirus) that belongs to the family Togaviridae, genus Alpha virus.(6) Alpha viruses can be divided into New and Old World viruses. Chikungunya virus is part of the Semliki Forest SF group of Old World Alpha viruses. Chikungunya virus is a member of the arthritogenic alpha viruses, but some cases also include meningeo-encephalitis and hemorrhagic diseases too. Chikungunya and O’nyong virus have 85% similarities in their symptoms. Chikungunya virus is a small (about 60-70 nm diameter), spherical, enveloped, positive-stranded RNA virus. The chikungunya virus genome is 11,805 nucleotides long and encodes for two polyproteins. The virus consist of four nonstructural proteins and three structural proteins. (7)

nsP1

nsP2

nsP3

nsP4

C

E3

E2

6K

E1

Junction

                      Figure 1: Chikununya virus genome structure (8)

2.       Virus Replication

Virions located on the surface of the cell membrane enter the host cells by fusion and endocytosis of the viral envelope (9, 10). The uncoating of the Virions occurs in the cytoplasm. The site of mRNA transcription is in the cell cytoplasm. Replication is not restricted to a particular tissue or organs. Figure 2 shows replication as under:

Figure 2: Replication of CHIKV (11)

3.       History:

The disease was first detected in 1953 in Africa following an outbreak on the Makonde Plateau in a Swahili village in the Newalla district, Tanzania (12). The virus was isolated from the serum of febrile patient. The name chikungunya is derived from the Makonde word kungunyala, meaning “that which bends up” in reference to the stooped posture developed as a result of the arthritic symptoms of the disease. In Swahili, this means “the illness of the bended walker”.

Chikungunya virus likely originated in the Central /East Africa (13), where the virus has been found to circulate in a sylvatic cycle between forest-dwelling mosquitoes and non-human primates. Currently, chikungunya fever has been identified in nearly 40 countries. Recent epidemics in Indian Ocean an Americas have led to the recognition that CHIKV is capable of moving into previously unaffected areas and causing significant levels of human suffering. (14) In 2008, chikungunya was listed as a US National institute Of Allergy and Infectious Disease (NIAID)category c priority pathogen.

4.       Symptoms:

Most of people infected with Chikungunya virus will develop some symptoms are fever and very debilitating joint pain. Symptoms usually begin 3-7 days after being bitten by infected mosquito. Other symptoms may include headache, muscle pain, joint swelling, or rash. Chikungunya disease does not often results in death, but the symptoms can be severe and disabling. Most patients feel better within a week. In some people, the joint pain may persist for months. People at risk for more severe disease include newborns infected around the time of birth, older adults (>60 years), and people with medical conditions such as high blood pressure, diabetes, or heart disease. Once a person has been infected, he or she is likely to be protected from future infections

5.       Diagnostic techniques:

Several methods can be used for diagnosis.

1. Enzyme-linked immunosorbent assays (ELISA), Serologic tests may confirm the presence of IgM and IgG anti-chikungunya antibodies. An IgM antibody level is highest 3 to 5 weeks after the onset of illness and persists for about 2 months. Samples collected during the first week after the onset of symptoms should be tested by both serological and virological methods (RT-PCR). (15,16)
2. Reverse transcription-polymerase chain reaction (RT-PCR) methods are available but are of variable sensitivity. RT-PCR products from clinical samples may also be uses for genotyping of the virus, allowing comparisons with virus samples from various geographical sources. (17)
3. Immunofluorescence assays are sensitive and specific but lack the ability to quantify antibodies, are subjective, and require specific equipment and training. (18)
4. Plaque reduction neutralization tests (PRNT) are very useful because they are quite specific for alpha viruses and are gold standard for confirmation of serological test results, however it require live virus and special laboratory containment equipments. (19)
5. Haemagglutination-inhibition test used to diagnose disease by distinguishing chikungunya strain. Chikungunya is confirmed when symptoms such as fever and joint pain seen along with four fold Haemagglutination Inhibition antibody difference in paired serum samples. This turns positive within 5 to 8 days of infection. (20,21)
6. POC (Point-Of-Care) Assays has been recommended to facilitate outbreak control. Rapid CHIKV IgM POC tests are now available, but little information exists regarding their performance. (22) Diagnosis of such cases require discrimination between CHIKV, Dengue and Zika Virus, this could be facilitated by use of reliable POC Assay. POC tests are highly cost-effective because they are easy to perform.

6. Vaccine Research:

                A phase 2 clinical vaccine trial sponsored by the US Government in 2000, used a live, attenuated virus, developing  viral resistance in 98% of those tested after 28 days and 85% still showed resistance after one year.(10) However, live chikungunya vaccines are still questionable as there could be a risk of a live vaccine possibly inducing chronic rheumatism.(23)

DNA vaccination is a technique for protecting an organism against disease by injecting it with genetically engineered DNA to produce an immunological response. Nucleic acid vaccines are still experimental. DNA vaccines have advantages over conventional vaccines as they have ability to induce a wider range of immune response types.

The recent vaccine cassette was designed based on chikungunya virus capsid and Envelop specific consensus sequences with several modifications, including codon optimization, RNA optimization, the addition of a Kozak sequence, and a substituted immunoglobin E leader sequence. These results support further study of the use of consensus CHIKV antigen in a potential vaccine cocktail.

      Insecticide susceptibility status and major detoxifying enzymes activities in Aedes Albopictus (Skuse), Vector of dengue and Chikungunya in Northern part of West Bengal, India 27 Feb 2017.(10) Vector control with the use of insecticides remains the suitable method of choice to stop the transmission of these diseases.

7. Clinical Manifestations:
8. Rheumatic manifestations associated with Chikungunya virus infection:

A study of 307 patients with 32 month follow-up done on 2017 Feb 23. A Cohort of 307 patients underwent rheumatologic examinations for pain secondary to Chikungunya virus infection. The long term evaluation was conducted by telephone survey 1 and 2 years after the onset of the viral infection. At inclusion, mean age was 54 years (24-87) and 83.1% of the patients were female. Chronic joint pain was associated with synovitis in 64.2% of the patients, affecting primarily the wrists, the proximal interphalangeal joints of the fingers, and ankles.(24) Attempts to detect viral genome in joint fluid (10 patients) and synovial tissue (6 patients) using the RT-PCR technique were repeatedly unsuccessful. With a mean follow-up of 32 months, joint pain persisted in 83.1% of the patients. Functional impairment, however, was moderate, with a HAQ score of 0.44+/- 0.5.

2. Acute Respiratory Distress Syndrome,

An unusual case with all other symptoms of Chikungunya virus infection showed bilateral infiltrates involving all zones with normal cardiac size with no evidence of pleural effusion suggestive of ARDS. (25) The working diagnosis of mild ARDS as per Berlin criteria secondary to Chikungunya infection was established with baseline Acute Physiology and Chronic Health Evaluation score of 14

3. Cutaneous manifestations:

           Individuals with CHIKV fever frequently present with flushed appearance involving the face and trunk, followed by a diffuse erythematous maculopapular rash of the trunk and extremities, sometimes involving the palms and soles.(26) The rash gradually fades; may evolve into petechiae, urticaria, xerosis, or hypermelanosis; or resolve with desquamation.(18, 19)

4. Neurological manifestation:

       In the acute phase of illness  (reported during the outbreak in Indian Ocean in 2005-2006), 23 patients presented with neurological symptoms associated with abnormal CSF tests and positive CSF immunoglobulin M (IgM) or reverse-transcriptase polymerase chain reaction(RT-PCR) for Chikungunya virus.(27) Clinical manifestations in this outbreak included altered mental status or behavior in 95%, headache in 30.4%, seizures in 26%, motor dysfunction in 4.3%, and sensorineural abnormalities in 8.7%.

8. Outbreak of Chikungunya in Pakistan:

Chikungunya virus was found as early as 1983(28). In fact, a fewer patients with chikungunya were also reported in Lahore during the 2011 dengue outbreak(29). The current outbreak(30) is said to have started on the second week of December, 2016. Different health-care authorities in Karachi estimated the total number of patients to be more than 30,000. The National Institutes of Health, Pakistan, and Armed Forces Institute of Pathology, Pakistan, have so for confirmed more than 4000 cases through qualitative RT-PCR. Ministry of Health Services, Regulation and Coordination (NHSRC) has for the first time on 26 December officially reported the outbreak to the World Health Organization (WHO).

“It is for the first time that Pakistan has officially documented the cases and has reported to WHO. The disease surfaced after some patients suffering from high fever and joint pain were taken to the facility. Pakistan undergoing substantial climate changes. The rising temperature has nurtured the outbreak of many arboviral illnesses in the region, including malaria and dengue. The deplorable sanitary conditions of most Asian countries further adds fuel to the fire by providing excellent breeding grounds for arthropod vectors. Chikungunya is now spreading explosively in Karachi, Pakistan. Many patients develop neurological, cardiovascular, pulmonary, renal, ocular, and cutaneous sequelae following acute infection (31). Open sewers and feculent morasses, which are excellent breeding habitats for mosquitoes, can be found all throughout the city(29). There is an urgent need to get rid of the city of stagnant water bodies and to raise awareness via campaigns.

9. Prevention and Control:

The proximity of mosquito vector breeding sites to human habitation is a risk factor for chikungunya as well as for other diseases. Prevention and control relies heavily on reducing the number of natural and artificial water-filled containers habitats that support breeding of the mosquitoes. During outbreaks, clothing which minimizes skin exposure to the day-biting vectors is advised. Repellants can be applied to exposed skin, Insectide-treated mosquito nets for children, or sick or older afford good protection. Mosquito coils or other insecticide vaporizers may also reduce indoor biting.(32)

Basic precautions should be taken by people travelling to risk areas and these include use of repellents, wearing long sleeves and pants and ensuring rooms after fitted with screens to prevent mosquitoes from entering.

There is no specific antiviral drug treatment for chikungunya. It has now been shown that type1   Interferon sensing by non-myeloid cells plays a significant role in fighting against Chikungunya infection.  Treatment is directed primarily at relieving the symptoms, including the joint pain using anti-pyretic, optimal analgesics and fluids. There is no commercial chikungunya vaccine.

10. Conclusion:

        Chikungunya leads to (self-perceived) long term sequelae in a considerable proportion of the patients, impacting significantly on quality of life(33). Long-term chikungunya sequelae must be taken into account when dealing with this disease because of its important effects on public and individual health. Prospective large scale, long-term studies with objective assessment of signs and symptoms attributed to the disease are needed to optimally quantify and qualify these problems.

11. Recommendations:

  Following recommendations can be helpful in vector control and its transmission.

1. Advocacy, social mobilization, regulatory control for public health and empowerment of communities.
2. Collaboration within the health sector and with other sectors through the optimal use of resources, planning, monitoring and decision making.
3. Integration of non-chemical and chemical vector control methods and integration with other disease control measures.
4. Evidence-based decision making guided by operational research and entomological and epidemiological surveillance and evaluation.
5. Development of adequate human resources, training and career structures at national and local level to promote capacity building and manage Integrated Vector Management (IVM).

Conflict of Interest

The authors declare no conflict of interest.

Acknowledgment

Special thanks to Prof. Shoaib Shafi and Dr. Nadeem Ikram from Benazir Bhutto Hospital, Rawalpindi for kind guidance and support. We also thank to Dr. Usman Waheed from Safe Blood Transfusion Program, Pakistan for kind guidance during review work.

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